Basic Information

IDDRAMP02397
SequenceAVPDVAFNAYG
Length11
NameBig defensin (RPD-1)
SourceVenerupis philippinarum (Japanese carpet shell) (Tapes japonica)
ActivityAntimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Anti-cancer
PathogenGram-positive bacteria: Staphylococcus aureus (MIC=9.6 mg/L), Bacillus subtilis (MIC=76.8 mg/L), Micrococcus tetragenus (MIC=38.4 mg/L);##Gram-negative bacteria: Escherichia coli (MIC=76.8 mg/L), Vibrio parahaemolyticus (MIC=19.2 mg/L), Vibrio anguillarum (MIC=19.2 mg/L).
Hemolytic ActivityNo hemolysis information or data found in the reference(s) presented in this entry
CytotoxicityNot included yet
N-terminal ModificationNot included yet
C-terminal ModificationNot included yet
Linear/Cyclic/BranchedNot included yet
Uniprot P86316
PDB
3D View
PDB DownloadDownload PDB Predicted by Alphafold2
PubMed ID14673509

Physicochemical Properties

Residues11
SequenceAVPDVAFNAYG
Molecular Weight1123.214
Grand Average of Hydropathy0.573
Isoelectric Point4.05
Charge at pH 7.4-1.394
Secondary StructureHelix: 0.364, Turn: 0.273, Sheet: 0.273
Instability Index12.027
Aromaticity0.182

Similar Structure Search

Candidates based on structure

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