Basic Information

IDDRAMP00878
SequenceGVIPCGESCVFIPCISTLLGCSCKNKVCYRN
Length31
NameCirculin-B (CIRB; Plant defensin)
SourceChassalia parviflora
ActivityAntimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antiviral, Antifungal
Pathogen[Ref.10430870]Gram-positive bacterium: (L-salt): Staphylococcus aureus (MIC=13.5 µM).##Gram-negative bacteria: (L-salt, H-salt) (MIC µM): Escherichia coli (0.41, >500), Pseudomonas aeruginosa (25.5, 48), Proteus vulgaris (6.8, >500), Klebsiella oxytoca (8.2, 15.6).##Fungi (H-salt): Candida kefyr (MIC=29 µM).##NOTE: L-salt = Medium with 10 mM phosphate buffer; H-salt = L-salt supplemented with 100 mM NaCl.##[Ref.18008336]Virus:HIV:inhibition the cytopathic effects of HIV-1 infection in cultured human T-lymphoblast (CEM-SS) cells(EC50=40-260 nM).
Hemolytic Activity[Ref.10430870] EC50 = 550 μM against blood type A human erythrocytes.
Cytotoxicity[Ref.10430870] It caused 50% cell growth inhibition of mouse fibroblasts at 820 μM.##[Ref.18008336]CEM-SS cells:IC50=500 nM.
N-terminal ModificationCyclization (N termini to C termini)
C-terminal ModificationCyclization (C termini to N termini)
Linear/Cyclic/BranchedCyclic
Uniprot P56879
PDB 2ERI
3D View
PDB DownloadDownload PDB Predicted by Alphafold2
PubMed ID10430870, 18008336, 8920961

Physicochemical Properties

Residues31
SequenceGVIPCGESCVFIPCISTLLGCSCKNKVCYRN
Molecular Weight3307.97
Grand Average of Hydropathy0.642
Isoelectric Point8.334
Charge at pH 7.41.404
Secondary StructureHelix: 0.323, Turn: 0.323, Sheet: 0.097
Instability Index28.761
Aromaticity0.065

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