Basic Information

IDDRAMP29074
SequenceKRFWQLVPLAIKIYRAWKRR
Length20
NamedCATH (duck cathelicidin)
SourceAnas platyrhynchos platyrhynchos (Northern mallard)
ActivityAntimicrobial, Antibacterial, Anti-Gram-, Anti-Gram+
Pathogen[Ref.32698035] Gram-positive bacteria: S. aureus KCTC 1621 (MIC = 8 μM), S. epidermidis KCTC 1917 (MIC = 8 μM), B. subtilis KCTC 3068 (MIC = 8 μM);##Resistant Gram-positive bacteria: MRSA CCARM 3089 (MIC = 16 μM), MRSA CCARM 3090 (MIC = 16 μM), MRSA CCARM 3095 (MIC = 8 μM), VREF ATCC 51559(MIC = 16 μM);##Gram-negative bacteria: E. coli KCTC 1682 (MIC = 8 μM), P. aeruginosa KCTC 1637(MIC = 16 μM), S. typhimurium KCTC 1926 (MIC = 4 μM);##Resistant Gram-negative bacteria: MDRPAd CCARM 2095 (MIC = 16 μM), MDRPA CCARM 2109 (MIC = 16 μM); ##Yeast: C. albicans KCTC 7965 (MIC = 8 μM), C. albicans KCTC 7121 (MIC = 16 μM).
Hemolytic Activity[Ref.32698035] HC10 = 5.1 μM. Note: HC10 is the peptide concentration that caused 10% hemolysis of sheep red blood cells (sRBCs).
Cytotoxicity[Ref.32698035] At the concentration of 1.25, 2.5, 5, 10, 20, 40 and 80 μM, the cell survival of dCATH against human bone marrow SH-SY5Y cells is 103%, 103%, 100%, 68%, 36%, 13% and 8%.
N-terminal ModificationFree
C-terminal ModificationFree
Linear/Cyclic/BranchedLinear
Uniprot A0A493U1S6
PDB
3D View
PDB DownloadDownload PDB Predicted by Alphafold2
PubMed ID32698035

Physicochemical Properties

Residues20
SequenceKRFWQLVPLAIKIYRAWKRR
Molecular Weight2629.203
Grand Average of Hydropathy-0.535
Isoelectric Point12
Charge at pH 7.46.547
Secondary StructureHelix: 0.450, Turn: 0.050, Sheet: 0.200
Instability Index63.425
Aromaticity0.2

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