Basic Information

IDDRAMP00980
SequenceAQRCGDQARGAKCPNCLCCGKYGFCGSGDAYCGAGSCQSQCRGC
Length44
NameAntimicrobial peptide 1a (WAMP-1a; Plant defensin)
SourceTriticum kiharae (wheat)
ActivityAntimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal
PathogenFungi: Bipolaris sorokiniana (IC50=5 µg/ml), Botrytis cinerea (IC50=20 µg/ml), Fusarium oxysporum (IC50=5 µg/ml), Fusarium solani (IC50=5 µg/ml), Fusarium verticillioides (IC50=30 µg/ml), Neurospora crassa (IC50=10 µg/ml);##Gram-positive bacterium: Clavibacter michiganensis (1.3cm inhibition for 2.5 µg/50µl);##Gram-negative bacteria: Erwinia carotovora (1.1cm for 2.5 µg/50µl), Pseudomonas syringae (0.9cm for 2.5 µg/50µl).
Hemolytic ActivityNo hemolysis information or data found in the reference(s) presented in this entry
CytotoxicityNot included yet
N-terminal ModificationNot included yet
C-terminal ModificationNot included yet
Linear/Cyclic/BranchedNot included yet
Uniprot P85966
PDB 2LB7
3D View
PDB DownloadDownload PDB Predicted by Alphafold2
PubMed ID19583772, 16269343

Physicochemical Properties

Residues44
SequenceAQRCGDQARGAKCPNCLCCGKYGFCGSGDAYCGAGSCQSQCRGC
Molecular Weight4445.016
Grand Average of Hydropathy-0.35
Isoelectric Point8.407
Charge at pH 7.42.354
Secondary StructureHelix: 0.091, Turn: 0.318, Sheet: 0.136
Instability Index24.641
Aromaticity0.068

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Candidates based on structure

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